Package: treestats
Type: Package
Title: Phylogenetic Tree Statistics
Version: 1.71.13
Authors@R: c(person(given = "Thijs",
        family = "Janzen",
        email = "thijsjanzen@gmail.com",
        role = c("cre", "aut"),
        comment = c(ORCID = "0000-0002-4162-1140")))
Maintainer: Thijs Janzen <thijsjanzen@gmail.com>
Description: Collection of phylogenetic tree statistics, collected
        throughout the literature. All functions have been written to
        maximize computation speed. The package includes umbrella
        functions to calculate all statistics, all balance associated
        statistics, or all branching time related statistics.
        Furthermore, the 'treestats' package supports summary statistic
        calculations on Ltables, provides speed-improved coding of
        branching times, Ltable conversion and includes algorithms to
        create intermediately balanced trees. Full description can be
        found in Janzen (2024) <doi:10.1016/j.ympev.2024.108168>.
License: GPL-3
Encoding: UTF-8
Depends: Rcpp
LinkingTo: Rcpp, RcppArmadillo, nloptr
Imports: ape, nloptr, treebalance, DDD, RSpectra
Suggests: phytools, phyloTop, testthat, geiger, nLTT, castor, adephylo,
        ggplot2, tibble, dplyr, tidyr, picante, lintr, rmarkdown,
        knitr, igraph, Matrix, pheatmap, ggdendro, dendextend, Matrix,
        TreeSim, nlme
BugReports: https://github.com/thijsjanzen/treestats/issues
URL: https://thijsjanzen.github.io/treestats/
VignetteBuilder: knitr
SystemRequirements: C++17
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: cmake libglpk-dev libgmp3-dev libxml2-dev
Repository: https://thijsjanzen.r-universe.dev
Date/Publication: 2026-07-04 07:25:54 UTC
RemoteUrl: https://github.com/thijsjanzen/treestats
RemoteRef: HEAD
RemoteSha: 5ce22ec00e5136732c7f06d06dfbb296ff4b2826
NeedsCompilation: yes
Packaged: 2026-07-04 08:42:42 UTC; root
Author: Thijs Janzen [cre, aut] (ORCID:
    <https://orcid.org/0000-0002-4162-1140>)