Type: Package
Package: junctions
Title: The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages
Version: 2.1.4
Authors@R: 
    person(given = "Thijs",
           family = "Janzen",
           role = c("aut", "cre"),
           email = "thijsjanzen@gmail.com")
Description: Individual based simulations of hybridizing populations,
        where the accumulation of junctions is tracked. Furthermore,
        mathematical equations are provided to verify simulation
        outcomes. Both simulations and mathematical equations are based
        on Janzen (2018, <doi:10.1101/058107>) and Janzen (2022,
        <doi:10.1111/1755-0998.13519>).
License: GPL (>= 2)
URL: https://thijsjanzen.github.io/junctions/
BugReports: https://github.com/thijsjanzen/junctions/issues
Depends: RcppParallel (>= 5.0.0)
Imports: nloptr, Rcpp, tibble
Suggests: dplyr, ggplot2, knitr, magrittr, rmarkdown, testthat, tidyr
LinkingTo: nloptr, Rcpp, RcppParallel
VignetteBuilder: knitr
Encoding: UTF-8
RoxygenNote: 7.3.3
SystemRequirements: C++17
Config/pak/sysreqs: cmake make
Repository: https://thijsjanzen.r-universe.dev
Date/Publication: 2026-03-06 17:17:44 UTC
RemoteUrl: https://github.com/thijsjanzen/junctions
RemoteRef: HEAD
RemoteSha: c71e9bd210541d2349ff2e47d32aa45ee8c3e785
NeedsCompilation: yes
Packaged: 2026-06-24 05:36:34 UTC; root
Author: Thijs Janzen [aut, cre]
Maintainer: Thijs Janzen <thijsjanzen@gmail.com>